Biomolecule-directed assembly of nanoscale building blocks studied via lattice Monte Carlo simulation.
نویسندگان
چکیده
We perform lattice Monte Carlo simulations to study the self-assembly of functionalized inorganic nanoscale building blocks using recognitive biomolecule linkers. We develop a minimal coarse-grained lattice model for the nanoscale building block (NBB) and the recognitive linkers. Using this model, we explore the influence of the size ratio of linker length to NBB diameter on the assembly process and the structural properties of the resulting aggregates, including the spatial distribution of NBBs and aggregate topology. We find the constant-kernel Smoluchowski theory of diffusion-limited cluster-cluster aggregation describes the aggregation kinetics for certain size ratios.
منابع مشابه
Modeling and Simulations of Multicellular Aggregate Self-assembly in Biofabrication Using Kinetic Monte Carlo Methods
We employ a three-dimensional (3D) lattice model based on the kinetic Monte Carlo (KMC) method to study cell self-assembly and cellular aggregate fusion of multicellular aggregate systems. This model is developed to describe and predict time evolution of postprinting morphological structure formation during morphogenesis of tissues or organs in a novel biofabrication process known as bioprintin...
متن کاملEvaluating Quasi-Monte Carlo (QMC) algorithms in blocks decomposition of de-trended
The length of equal minimal and maximal blocks has eected on logarithm-scale logarithm against sequential function on variance and bias of de-trended uctuation analysis, by using Quasi Monte Carlo(QMC) simulation and Cholesky decompositions, minimal block couple and maximal are founded which are minimum the summation of mean error square in Horest power.
متن کاملTemporally Disordered Bond Percolation on the Directed Square Lattice.
Simple models of directed bond percolation with temporal disorder are introduced and studied via series expansions and Monte Carlo simulations. Series have been derived for the percolation probability on the directed square lattice. Analysis of the series revealed that the critical exponent b and critical point pc change continuously with the strength of the disorder. Monte Carlo simulation con...
متن کاملExactly Solvable Models for Self-Assembly
The field of self-assembly studies the spontaneous formation of order from preexisting components. It holds the promise of fabricating tomorrows materials and devices not by traditional methods, but by designing building blocks that will act as supramolecular “atoms” and form the desired structures without external input. Theoretical understanding in self-assembly has previously been achieved m...
متن کاملDirected assembly of Ru nanoclusters on Ru(0001)-supported graphene: STM studies and atomistic modeling
Directed assembly of an array of Ru nanoclusters (NCs) is achieved by deposition of Ru at around room temperature on a single layer of graphene supported on Ru(0001). In this system, directed assembly is guided by the periodic moiré structure of the buckled graphene sheet. Behavior is analyzed utilizing both scanning tunneling microscopy and atomistic lattice-gas modeling together with kinetic ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- The Journal of chemical physics
دوره 121 8 شماره
صفحات -
تاریخ انتشار 2004